Datasets

These datasets are ready to be explored with Gitools 2.2 and above. You may download the any heatmap file from here or open them directly from within the latest version of Gitools.

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Important
- Please make sure you are familiar with the TCGA publication guidelines when using any TCGA data for your research.
- The heatmap files available for download here are prepared to work with Gitools 2.2 (and newer).

Genes by project

This heatmap contains the information on mutation frequency and putative driver genes per project (across 31 projects from 13 different cancer sites) as reported in IntOGen-mutations. Driver genes were detected using OncodriveFM and OncodriveCLUST with IntOGen-mutations pipeline.

File size: 7.60M

Genes by site

This heatmap contains the information on mutation frequency and putative driver genes per cancer site (across 13 different cancer sites) as reported in IntOGen-mutations (link: http://www.intogen.org/mutations). Driver genes were detected using OncodriveFM and IntOGen-mutations pipeline.

File size: 2.89M

Pathways per project

This heatmap contains the information on mutation frequency and putative driver pathways per cancer site (across 13 different cancer sites) as reported in IntOGen-mutations

File size: 95.39K

Cancer drivers Chromatin Regulatory Factors per project

This heatmap contains the information on mutation frequency and putative driver Chromatin Regulatory Factors per project (across 31 projects from 13 different cancer sites) as reported in Gonzalez-Perez et al., Genome Biology 2013.

This heat-map reproduces the upper panel of Figure 1 of the manuscript: The mutational landscape of chromatin regulatory factors across 4623 tumor samples. Genome Biology.

File size: 4.09M

Cancer drivers Chromatin Regulatory Factors per site

This heatmap contains the information on mutation frequency and putative driver genes per cancer site (across 13 different cancer sites) as reported in Gonzalez-Perez et al., Genome Biology 2013

This heat-map reproduces the lower panel of Figure 1 of the manuscript: The mutations landscape of chromatin regulatory factors across 4623 tumor samples. Genome Biology.

File size: 3.78M